| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8048939.1 | FACT COMPLEX SUBUNIT SSRP1 | contig_7146_pilon | 6869 | 15209 | + |
| CDS | |||||
| CAI8048939.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8048939.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08512 | Rttp106-like_middle | Histone chaperone Rttp106-like, middle domain | Domain | Interproscan |
| PF21103 | PH1_SSRP1-like | SSRP1 PH domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000969 | Family | FACT complex subunit SSRP1/POB3 | Interproscan |
| IPR011993 | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR013719 | Domain | Histone chaperone RTT106/FACT complex subunit SPT16-like, middle domain | Interproscan |
| IPR048993 | Domain | FACT complex subunit SSRP1-like, first PH domain | Interproscan |
| IPR050454 | Family | RTT106/SSRP1 Histone Chaperone/FACT Complex | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45849 | FACT COMPLEX SUBUNIT SSRP1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0031491 | Molecular Function | nucleosome binding | Interproscan |
| GO:0035101 | Cellular Component | FACT complex | Interproscan |
| GO:0042393 | Molecular Function | histone binding | Interproscan |
| GO:1902275 | Biological Process | regulation of chromatin organization | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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