Detailed information of CAI8048029.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8048029.1THO2 PROTEINcontig_6946_pilon1752730559-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11262Tho2Transcription factor/nuclear export subunit protein 2FamilyInterproscan
PF11732Thoc2Transcription- and export-related complex subunitFamilyInterproscan
PF135322OG-FeII_Oxy_22OG-Fe(II) oxygenase superfamilyDomainInterproscan
PF16134THOC2_NTHO complex subunit 2 N-terminusFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005123DomainOxoglutarate/iron-dependent dioxygenaseInterproscan
IPR021418DomainTHO complex, subunitTHOC2, C-terminalInterproscan
IPR021726DomainTHO complex, subunitTHOC2, N-terminalInterproscan
IPR027450DomainAlpha-ketoglutarate-dependent dioxygenase AlkB-likeInterproscan
IPR032302DomainTHO complex subunit 2, N-terminal domainInterproscan
IPR037151Homologous_superfamilyAlpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyInterproscan
IPR040007FamilyTHO complex subunit 2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR21597THO2 PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000347Cellular ComponentTHO complexInterproscan
GO:0000445Cellular ComponentTHO complex part of transcription export complexInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0006406Biological ProcessmRNA export from nucleusInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP