| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8043615.1 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER | contig_5922_pilon | 56679 | 68859 | - |
| CDS | |||||
| CAI8043615.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8043615.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06733 | DEAD_2 | DEAD_2 | Family | Interproscan |
| PF07690 | MFS_1 | Major Facilitator Superfamily | Family | Interproscan |
| PF13307 | Helicase_C_2 | Helicase C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001958 | Family | Tetracycline resistance protein TetA/multidrug resistance protein MdtG-like | Interproscan |
| IPR006554 | Domain | Helicase-like, DEXD box c2 type | Interproscan |
| IPR006555 | Domain | ATP-dependent helicase, C-terminal | Interproscan |
| IPR010614 | Domain | RAD3-like helicase, DEAD | Interproscan |
| IPR011701 | Family | Major facilitator superfamily | Interproscan |
| IPR013020 | Family | ATP-dependent helicase Rad3/Chl1-like | Interproscan |
| IPR014013 | Domain | Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type | Interproscan |
| IPR020846 | Domain | Major facilitator superfamily domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR036259 | Homologous_superfamily | MFS transporter superfamily | Interproscan |
| IPR045028 | Family | Helicase superfamily 1/2, DinG/Rad3-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11472 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003678 | Molecular Function | DNA helicase activity | Interproscan |
| GO:0004386 | Molecular Function | helicase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006139 | Biological Process | nucleobase-containing compound metabolic process | Interproscan |
| GO:0010569 | Biological Process | regulation of double-strand break repair via homologous recombination | Interproscan |
| GO:0016818 | Molecular Function | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | Interproscan |
| GO:0022857 | Molecular Function | transmembrane transporter activity | Interproscan |
| GO:0032508 | Biological Process | DNA duplex unwinding | Interproscan |
| GO:0045910 | Biological Process | negative regulation of DNA recombination | Interproscan |
| GO:0055085 | Biological Process | transmembrane transport | Interproscan |
| GO:0070182 | Molecular Function | DNA polymerase binding | Interproscan |
| GO:0090657 | Biological Process | telomeric loop disassembly | Interproscan |
| GO:1904430 | Biological Process | negative regulation of t-circle formation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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