| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8042773.1 | TRNA/RRNA METHYLTRANSFERASE | contig_5734_pilon | 34706 | 35242 | + |
| CDS | |||||
| CAI8042773.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8042773.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00588 | SpoU_methylase | SpoU rRNA Methylase family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001537 | Domain | tRNA/rRNA methyltransferase, SpoU type | Interproscan |
| IPR004384 | Family | RNA methyltransferase TrmJ/LasT | Interproscan |
| IPR029026 | Homologous_superfamily | tRNA (guanine-N1-)-methyltransferase, N-terminal | Interproscan |
| IPR029028 | Homologous_superfamily | Alpha/beta knot methyltransferases | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR42786 | TRNA/RRNA METHYLTRANSFERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0002128 | Biological Process | tRNA nucleoside ribose methylation | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0008173 | Molecular Function | RNA methyltransferase activity | Interproscan |
| GO:0052665 | Molecular Function | obsolete tRNA (uracil-2'-O-)-methyltransferase activity | Interproscan |
| GO:0052666 | Molecular Function | obsolete tRNA (cytosine-2'-O-)-methyltransferase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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