| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8042734.1 | EXOSOME COMPLEX COMPONENT | contig_5732_pilon | 62866 | 63513 | + |
| CDS | |||||
| CAI8042734.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8042734.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01138 | RNase_PH | 3' exoribonuclease family, domain 1 | Domain | Interproscan |
| PF03725 | RNase_PH_C | 3' exoribonuclease family, domain 2 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001247 | Domain | Exoribonuclease, phosphorolytic domain 1 | Interproscan |
| IPR011807 | Family | Exosome complex component Rrp41 | Interproscan |
| IPR015847 | Domain | Exoribonuclease, phosphorolytic domain 2 | Interproscan |
| IPR020568 | Homologous_superfamily | Ribosomal protein uS5 domain 2-type superfamily | Interproscan |
| IPR027408 | Homologous_superfamily | PNPase/RNase PH domain superfamily | Interproscan |
| IPR036345 | Homologous_superfamily | Exoribonuclease, PH domain 2 superfamily | Interproscan |
| IPR050080 | Family | Ribonuclease PH | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11953 | EXOSOME COMPLEX COMPONENT | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000177 | Cellular Component | cytoplasmic exosome (RNase complex) | Interproscan |
| GO:0000178 | Cellular Component | exosome (RNase complex) | Interproscan |
| GO:0006401 | Biological Process | RNA catabolic process | Interproscan |
| GO:0016075 | Biological Process | rRNA catabolic process | Interproscan |
| GO:0016896 | Molecular Function | RNA exonuclease activity, producing 5'-phosphomonoesters | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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