| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8042707.1 | UVRABC SYSTEM PROTEIN A | contig_5732_pilon | 45214 | 51938 | - |
| CDS | |||||
| CAI8042707.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8042707.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02151 | UVR | UvrB/uvrC motif | Family | Interproscan |
| PF08459 | UvrC_RNaseH_dom | UvrC RNAse H endonuclease domain | Domain | Interproscan |
| PF17755 | UvrA_DNA-bind | UvrA DNA-binding domain | Domain | Interproscan |
| PF17760 | UvrA_inter | UvrA interaction domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001162 | Domain | UvrC, RNAse H endonuclease domain | Interproscan |
| IPR001943 | Domain | UVR domain | Interproscan |
| IPR003439 | Domain | ABC transporter-like, ATP-binding domain | Interproscan |
| IPR004602 | Family | UvrABC system subunit A | Interproscan |
| IPR004791 | Family | UvrABC system, subunit C | Interproscan |
| IPR013815 | Homologous_superfamily | ATP-grasp fold, subdomain 1 | Interproscan |
| IPR017871 | Conserved_site | ABC transporter-like, conserved site | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR036876 | Homologous_superfamily | UVR domain superfamily | Interproscan |
| IPR038476 | Homologous_superfamily | UvrC, RNAse H endonuclease domain superfamily | Interproscan |
| IPR041102 | Domain | UvrA, interaction domain | Interproscan |
| IPR041552 | Domain | UvrA DNA-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43152 | UVRABC SYSTEM PROTEIN A | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0006289 | Biological Process | nucleotide-excision repair | Interproscan |
| GO:0009380 | Cellular Component | excinuclease repair complex | Interproscan |
| GO:0009381 | Molecular Function | excinuclease ABC activity | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
