| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8041963.1 | TPR REPEAT-CONTAINING PROTEIN PA4667 | contig_5601_pilon | 24144 | 26018 | + |
| CDS | |||||
| CAI8041963.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8041963.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13174 | TPR_6 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13181 | TPR_8 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13432 | TPR_16 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13525 | YfiO | Outer membrane lipoprotein | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR039565 | Domain | Outer membrane lipoprotein BamD-like | Interproscan |
| IPR051012 | Family | Cellulose Synthase/LPS Assembly/PSI Assembly | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45586 | TPR REPEAT-CONTAINING PROTEIN PA4667 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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