Detailed information of CAI8040515.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8040515.1PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTERcontig_5291_pilon1174913392-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 MiddleDomainInterproscan
PF10518TAT_signalTAT (twin-arginine translocation) pathway signal sequenceMotifInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000914DomainSolute-binding protein family 5 domainInterproscan
IPR006311Conserved_siteTwin-arginine translocation pathway, signal sequenceInterproscan
IPR019546Conserved_siteTwin-arginine translocation pathway, signal sequence, bacterial/archaealInterproscan
IPR023765Conserved_siteSolute-binding protein family 5, conserved siteInterproscan
IPR030678FamilyPeptide/nickel binding protein, MppA-typeInterproscan
IPR039424FamilySolute-binding protein family 5Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR30290PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0015833Biological Processpeptide transportInterproscan
GO:0030288Cellular Componentouter membrane-bounded periplasmic spaceInterproscan
GO:0043190Cellular ComponentATP-binding cassette (ABC) transporter complexInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:1904680Molecular Functionpeptide transmembrane transporter activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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