Detailed information of CAI8040370.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8040370.1TRANSCRIPTION TERMINATION FACTOR RHOcontig_5269_pilon23474305+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00005ABC_tranABC transporterDomainInterproscan
PF00006ATP-synt_abATP synthase alpha/beta family, nucleotide-binding domainDomainInterproscan
PF07497Rho_RNA_bindRho termination factor, RNA-binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000194DomainATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR004665FamilyTranscription termination factor RhoInterproscan
IPR011113DomainRho termination factor, RNA-binding domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR015856DomainABC transporter, CbiO/EcfA subunitInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46425TRANSCRIPTION TERMINATION FACTOR RHOInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006353Biological ProcessDNA-templated transcription terminationInterproscan
GO:0008186Molecular FunctionATP-dependent activity, acting on RNAInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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