| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8039592.1 | PSEUDOURIDINE SYNTHASE FAMILY PROTEIN-RELATED | contig_5111_pilon | 28671 | 29426 | + |
| CDS | |||||
| CAI8039592.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8039592.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00849 | PseudoU_synth_2 | RNA pseudouridylate synthase | Family | Interproscan |
| PF01479 | S4 | S4 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000748 | Family | Pseudouridine synthase, RsuA/RluB/E/F | Interproscan |
| IPR002942 | Domain | RNA-binding S4 domain | Interproscan |
| IPR006145 | Domain | Pseudouridine synthase, RsuA/RluA-like | Interproscan |
| IPR018496 | Conserved_site | Pseudouridine synthase, RsuA/RluB/E/F, conserved site | Interproscan |
| IPR020094 | Homologous_superfamily | Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal | Interproscan |
| IPR020103 | Homologous_superfamily | Pseudouridine synthase, catalytic domain superfamily | Interproscan |
| IPR036986 | Homologous_superfamily | RNA-binding S4 domain superfamily | Interproscan |
| IPR042092 | Homologous_superfamily | Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain | Interproscan |
| IPR050343 | Family | Ribosomal RNA Pseudouridine Synthase RsuA | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47683 | PSEUDOURIDINE SYNTHASE FAMILY PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001522 | Biological Process | pseudouridine synthesis | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0009451 | Biological Process | RNA modification | Interproscan |
| GO:0009982 | Molecular Function | pseudouridine synthase activity | Interproscan |
| GO:0016866 | Molecular Function | intramolecular transferase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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