| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8038779.1 | E3 UBIQUITIN-PROTEIN LIGASE RAD18 | contig_4967_pilon | 10525 | 16692 | + |
| CDS | |||||
| CAI8038779.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8038779.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Ubiquitin Family | E3|E3 activity RING|U-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF14835 | zf-RING_6 | zf-RING of BARD1-type protein | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR039503 | Domain | BARD1, Zinc finger, RING-type | Interproscan |
| IPR039577 | Family | E3 ubiquitin-protein ligase Rad18 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14134 | E3 UBIQUITIN-PROTEIN LIGASE RAD18 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003697 | Molecular Function | single-stranded DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006301 | Biological Process | postreplication repair | Interproscan |
| GO:0006513 | Biological Process | protein monoubiquitination | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| GO:0097505 | Cellular Component | Rad6-Rad18 complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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