| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8030063.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | contig_3513_pilon | 84007 | 88360 | + |
| CDS | |||||
| CAI8030063.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8030063.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Ubiquitin Family | E3|E3 activity|RBR |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| PF01485 | IBR | IBR domain, a half RING-finger domain | Domain | Interproscan |
| PF19422 | Ariadne | Ariadne domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR002867 | Domain | IBR domain | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR018957 | Domain | Zinc finger, C3HC4 RING-type | Interproscan |
| IPR031127 | Family | E3 ubiquitin ligase RBR family | Interproscan |
| IPR044066 | Domain | TRIAD supradomain | Interproscan |
| IPR045840 | Domain | Ariadne domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11685 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000151 | Cellular Component | ubiquitin ligase complex | Interproscan |
| GO:0000209 | Biological Process | protein polyubiquitination | Interproscan |
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0031624 | Molecular Function | ubiquitin conjugating enzyme binding | Interproscan |
| GO:0032436 | Biological Process | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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