| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8029780.1 | - | contig_3455_pilon | 3746 | 4705 | + |
| CDS | |||||
| CAI8029780.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8029780.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07676 | PD40 | WD40-like Beta Propeller Repeat | Repeat | Interproscan |
| PF14583 | Pectate_lyase22 | Oligogalacturonate lyase | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011659 | Repeat | WD40-like beta propeller | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR027946 | Domain | Oligogalacturonate lyase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| - | - | - |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0045490 | Biological Process | pectin catabolic process | Interproscan |
| GO:0047487 | Molecular Function | oligogalacturonide lyase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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