Detailed information of CAI8023122.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8023122.1BLUE CHEESEcontig_238_pilon4632759705+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01363FYVEFYVE zinc fingerDomainInterproscan
PF02138BeachBeige/BEACH domainFamilyInterproscan
PF20426NBCH_WD40Neurobeachin beta propeller domainRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000306DomainFYVE zinc fingerInterproscan
IPR000409DomainBEACH domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR017455DomainZinc finger, FYVE-relatedInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036372Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR046851DomainNeurobeachin, beta-propeller domainInterproscan
IPR051944FamilyBEACH domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46108BLUE CHEESEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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