Detailed information of CAI8022608.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8022608.1E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATEDcontig_2318_pilon2023779+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyE3|E3 activity RING|PHD
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF12148TTDTandem tudor domain within UHRF1DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR021991DomainUHRF1, tandem tudor domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR045134FamilyUHRF1/2-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14140E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0010216Biological Processobsolete negative regulation of gene expression via chromosomal DNA cytosine methylationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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