| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8022200.1 | CHORISMATE SYNTHASE | contig_2255_pilon | 17658 | 19847 | - |
| CDS | |||||
| CAI8022200.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8022200.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01264 | Chorismate_synt | Chorismate synthase | Family | Interproscan |
| PF03807 | F420_oxidored | NADP oxidoreductase coenzyme F420-dependent | Family | Interproscan |
| PF08501 | Shikimate_dh_N | Shikimate dehydrogenase substrate binding domain | Domain | Interproscan |
| PF18317 | SDH_C | Shikimate 5'-dehydrogenase C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000453 | Family | Chorismate synthase | Interproscan |
| IPR011342 | Family | Shikimate dehydrogenase | Interproscan |
| IPR013708 | Domain | Shikimate dehydrogenase substrate binding, N-terminal | Interproscan |
| IPR020541 | Conserved_site | Chorismate synthase, conserved site | Interproscan |
| IPR022893 | Family | Shikimate dehydrogenase family | Interproscan |
| IPR028939 | Domain | Pyrroline-5-carboxylate reductase, catalytic, N-terminal | Interproscan |
| IPR035904 | Homologous_superfamily | Chorismate synthase AroC superfamily | Interproscan |
| IPR036291 | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| IPR041121 | Domain | SDH, C-terminal | Interproscan |
| IPR046346 | Homologous_superfamily | Aminoacid dehydrogenase-like, N-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21085 | CHORISMATE SYNTHASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004107 | Molecular Function | chorismate synthase activity | Interproscan |
| GO:0004764 | Molecular Function | shikimate 3-dehydrogenase (NADP+) activity | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0009073 | Biological Process | aromatic amino acid family biosynthetic process | Interproscan |
| GO:0009423 | Biological Process | chorismate biosynthetic process | Interproscan |
| GO:0010181 | Molecular Function | FMN binding | Interproscan |
| GO:0019632 | Biological Process | shikimate metabolic process | Interproscan |
| GO:0050661 | Molecular Function | NADP binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
