| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8021845.1 | SORTING NEXIN | contig_218_pilon | 39191 | 51582 | - |
| CDS | |||||
| CAI8021845.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8021845.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|SH3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00018 | SH3_1 | SH3 domain | Domain | Interproscan |
| PF00787 | PX | PX domain | Domain | Interproscan |
| PF10456 | BAR_3_WASP_bdg | WASP-binding domain of Sorting nexin protein | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001452 | Domain | SH3 domain | Interproscan |
| IPR001683 | Domain | Phox homology | Interproscan |
| IPR019497 | Domain | Sorting nexin protein, WASP-binding domain | Interproscan |
| IPR027267 | Homologous_superfamily | AH/BAR domain superfamily | Interproscan |
| IPR036028 | Homologous_superfamily | SH3-like domain superfamily | Interproscan |
| IPR036871 | Homologous_superfamily | PX domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45827 | SORTING NEXIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0006897 | Biological Process | endocytosis | Interproscan |
| GO:0016197 | Biological Process | endosomal transport | Interproscan |
| GO:0031410 | Cellular Component | cytoplasmic vesicle | Interproscan |
| GO:0035091 | Molecular Function | phosphatidylinositol binding | Interproscan |
| GO:0097320 | Biological Process | plasma membrane tubulation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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