Detailed information of CAI8021448.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8021448.1RAB11-BINDING PROTEIN RELCHcontig_2155_pilon1849838530+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF13925Katanin_con80con80 domain of KataninDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR006594Conserved_siteLIS1 homology motifInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR026962FamilyKatanin p80 WD40 repeat-containing subunit B1Interproscan
IPR028021DomainKatanin p80 subunit, C-terminalInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR040362FamilyRAB11-binding protein RELCHInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR32059RAB11-BINDING PROTEIN RELCHInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005802Cellular Componenttrans-Golgi networkInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0008352Cellular Componentkatanin complexInterproscan
GO:0032367Biological Processintracellular cholesterol transportInterproscan
GO:0051013Biological Processmicrotubule severingInterproscan
GO:0055037Cellular Componentrecycling endosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP