| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8021190.1 | PORPHOBILINOGEN DEAMINASE | contig_2090_pilon | 42564 | 44682 | - |
| CDS | |||||
| CAI8021190.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8021190.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00745 | GlutR_dimer | Glutamyl-tRNAGlu reductase, dimerisation domain | Domain | Interproscan |
| PF01379 | Porphobil_deam | Porphobilinogen deaminase, dipyromethane cofactor binding domain | Domain | Interproscan |
| PF01488 | Shikimate_DH | Shikimate / quinate 5-dehydrogenase | Family | Interproscan |
| PF03900 | Porphobil_deamC | Porphobilinogen deaminase, C-terminal domain | Domain | Interproscan |
| PF05201 | GlutR_N | Glutamyl-tRNAGlu reductase, N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000343 | Family | Glutamyl-tRNA reductase | Interproscan |
| IPR000860 | Family | Porphobilinogen deaminase | Interproscan |
| IPR006151 | Domain | Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase | Interproscan |
| IPR015895 | Domain | Glutamyl-tRNA reductase, N-terminal | Interproscan |
| IPR015896 | Domain | Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain | Interproscan |
| IPR018214 | Conserved_site | Glutamyl-tRNA reductase, conserved site | Interproscan |
| IPR022417 | Domain | Porphobilinogen deaminase, N-terminal | Interproscan |
| IPR022418 | Domain | Porphobilinogen deaminase, C-terminal | Interproscan |
| IPR022419 | Binding_site | Porphobilinogen deaminase, dipyrromethane cofactor binding site | Interproscan |
| IPR036291 | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| IPR036343 | Homologous_superfamily | Glutamyl-tRNA reductase, N-terminal domain superfamily | Interproscan |
| IPR036453 | Homologous_superfamily | Glutamyl tRNA-reductase dimerization domain superfamily | Interproscan |
| IPR036803 | Homologous_superfamily | Porphobilinogen deaminase, C-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11557 | PORPHOBILINOGEN DEAMINASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004418 | Molecular Function | hydroxymethylbilane synthase activity | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006783 | Biological Process | heme biosynthetic process | Interproscan |
| GO:0008883 | Molecular Function | glutamyl-tRNA reductase activity | Interproscan |
| GO:0018160 | Biological Process | peptidyl-pyrromethane cofactor linkage | Interproscan |
| GO:0033014 | Biological Process | tetrapyrrole biosynthetic process | Interproscan |
| GO:0050661 | Molecular Function | NADP binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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