Detailed information of CAI8017228.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8017228.1SKP1contig_16283_pilon3449336098+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|SKP1

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01466Skp1Skp1 family, dimerisation domainDomainInterproscan
PF03931Skp1_POZSkp1 family, tetramerisation domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001232FamilyS-phase kinase-associated protein 1-likeInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR016072DomainSKP1 component, dimerisationInterproscan
IPR016073DomainSKP1 component, POZ domainInterproscan
IPR016897FamilyS-phase kinase-associated protein 1Interproscan
IPR036296Homologous_superfamilySKP1-like, dimerisation domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11165SKP1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0097602Molecular Functioncullin family protein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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