| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8016780.1 | PHOSPHATASE YCDX-RELATED | contig_16085_pilon | 13777 | 15606 | - |
| CDS | |||||
| CAI8016780.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8016780.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02811 | PHP | PHP domain | Family | Interproscan |
| PF14520 | HHH_5 | Helix-hairpin-helix domain | Domain | Interproscan |
| PF14716 | HHH_8 | Helix-hairpin-helix domain | Domain | Interproscan |
| PF14791 | DNA_pol_B_thumb | DNA polymerase beta thumb | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002054 | Domain | DNA-directed DNA polymerase X | Interproscan |
| IPR003141 | Domain | Polymerase/histidinol phosphatase, N-terminal | Interproscan |
| IPR003583 | Domain | Helix-hairpin-helix DNA-binding motif, class 1 | Interproscan |
| IPR004013 | Domain | PHP domain | Interproscan |
| IPR010996 | Domain | DNA polymerase beta-like, N-terminal domain | Interproscan |
| IPR016195 | Homologous_superfamily | Polymerase/histidinol phosphatase-like | Interproscan |
| IPR022311 | Family | DNA polymerase/3'-5' exonuclease PolX-like | Interproscan |
| IPR027421 | Homologous_superfamily | DNA polymerase lambda lyase domain superfamily | Interproscan |
| IPR029398 | Domain | DNA polymerase beta, thumb domain | Interproscan |
| IPR037160 | Homologous_superfamily | DNA polymerase, thumb domain superfamily | Interproscan |
| IPR043519 | Homologous_superfamily | Nucleotidyltransferase superfamily | Interproscan |
| IPR047967 | Domain | PolX, PHP domain | Interproscan |
| IPR050243 | Family | Probable phosphatase PHP | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR36928 | PHOSPHATASE YCDX-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0003887 | Molecular Function | DNA-directed DNA polymerase activity | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0042578 | Molecular Function | phosphoric ester hydrolase activity | Interproscan |
| GO:0071978 | Biological Process | bacterial-type flagellum-dependent swarming motility | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
