| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8015528.1 | GLYCINE BETAINE/PROLINE BETAINE TRANSPORT SYSTEM PERMEASE PROTEIN PROW | contig_15625_pilon | 3637 | 6787 | - |
| CDS | |||||
| CAI8015528.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8015528.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00005 | ABC_tran | ABC transporter | Domain | Interproscan |
| PF00528 | BPD_transp_1 | Binding-protein-dependent transport system inner membrane component | Family | Interproscan |
| PF00571 | CBS | CBS domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000515 | Domain | ABC transporter type 1, transmembrane domain MetI-like | Interproscan |
| IPR000644 | Domain | CBS domain | Interproscan |
| IPR003439 | Domain | ABC transporter-like, ATP-binding domain | Interproscan |
| IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
| IPR005892 | Family | Glycine betaine/proline betaine transport system ATP-binding protein ProV-like | Interproscan |
| IPR017871 | Conserved_site | ABC transporter-like, conserved site | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR035906 | Homologous_superfamily | MetI-like superfamily | Interproscan |
| IPR046342 | Homologous_superfamily | CBS domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47737 | GLYCINE BETAINE/PROLINE BETAINE TRANSPORT SYSTEM PERMEASE PROTEIN PROW | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005275 | Molecular Function | amine transmembrane transporter activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005887 | Cellular Component | plasma membrane | Interproscan |
| GO:0015226 | Molecular Function | carnitine transmembrane transporter activity | Interproscan |
| GO:0015871 | Biological Process | choline transport | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0031460 | Biological Process | glycine betaine transport | Interproscan |
| GO:0043190 | Cellular Component | ATP-binding cassette (ABC) transporter complex | Interproscan |
| GO:0055085 | Biological Process | transmembrane transport | Interproscan |
| GO:1902603 | Biological Process | carnitine transmembrane transport | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
