| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8014806.1 | DIHYDRODIPICOLINATE SYNTHASE | contig_1535_pilon | 59821 | 62680 | + |
| CDS | |||||
| CAI8014806.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8014806.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00701 | DHDPS | Dihydrodipicolinate synthetase family | Domain | Interproscan |
| PF01207 | Dus | Dihydrouridine synthase (Dus) | Family | Interproscan |
| PF01678 | DAP_epimerase | Diaminopimelate epimerase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001653 | Family | Diaminopimelate epimerase, DapF | Interproscan |
| IPR002220 | Family | DapA-like | Interproscan |
| IPR005263 | Family | 4-hydroxy-tetrahydrodipicolinate synthase, DapA | Interproscan |
| IPR013785 | Homologous_superfamily | Aldolase-type TIM barrel | Interproscan |
| IPR018510 | Active_site | Diaminopimelate epimerase, active site | Interproscan |
| IPR018517 | Conserved_site | tRNA-dihydrouridine synthase, conserved site | Interproscan |
| IPR020624 | Conserved_site | Schiff base-forming aldolase, conserved site | Interproscan |
| IPR035587 | Domain | DUS-like, FMN-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12128 | DIHYDRODIPICOLINATE SYNTHASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0008033 | Biological Process | tRNA processing | Interproscan |
| GO:0008837 | Molecular Function | diaminopimelate epimerase activity | Interproscan |
| GO:0008840 | Molecular Function | 4-hydroxy-tetrahydrodipicolinate synthase activity | Interproscan |
| GO:0009089 | Biological Process | lysine biosynthetic process via diaminopimelate | Interproscan |
| GO:0016829 | Molecular Function | lyase activity | Interproscan |
| GO:0017150 | Molecular Function | tRNA dihydrouridine synthase activity | Interproscan |
| GO:0050660 | Molecular Function | flavin adenine dinucleotide binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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