| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8013246.1 | LUPUS LA PROTEIN-RELATED | contig_14694_pilon | 33636 | 38523 | + |
| CDS | |||||
| CAI8013246.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8013246.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01833 | TIG | IPT/TIG domain | Domain | Interproscan |
| PF05383 | La | La domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002344 | Family | Lupus La protein | Interproscan |
| IPR002909 | Domain | IPT domain | Interproscan |
| IPR006630 | Domain | La-type HTH domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR014756 | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| IPR035892 | Homologous_superfamily | C2 domain superfamily | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR037245 | Homologous_superfamily | FIP-RBD, C-terminal domain superfamily | Interproscan |
| IPR045180 | Family | La domain containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22792 | LUPUS LA PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005844 | Cellular Component | obsolete polysome | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:1990904 | Cellular Component | ribonucleoprotein complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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