Detailed information of CAI8011543.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8011543.1DNA REPAIR PROTEIN RADAcontig_1405_pilon4791552933-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01406tRNA-synt_1etRNA synthetases class I (C) catalytic domainFamilyInterproscan
PF01938TRAMTRAM domainDomainInterproscan
PF09190DALR_2DALR domainDomainInterproscan
PF13481AAA_25AAA domainDomainInterproscan
PF13541ChlISubunit ChlI of Mg-chelataseDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002792DomainTRAM domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR004504FamilyDNA repair protein RadAInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR015273DomainCysteinyl-tRNA synthetase, class Ia, DALRInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR020588DomainDNA recombination and repair protein RecA-like, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR032678DomaintRNA synthetases class I, catalytic domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR32472DNA REPAIR PROTEIN RADAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0000725Biological Processrecombinational repairInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0004817Molecular Functioncysteine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006423Biological Processcysteinyl-tRNA aminoacylationInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP