Detailed information of CAI8011274.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8011274.1DNA HELICASE RECQ FAMILY MEMBERcontig_13998_pilon5369556780+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00570HRDCHRDC domainDomainInterproscan
PF01545Cation_effluxCation efflux familyFamilyInterproscan
PF09382RQCRQC domainDomainInterproscan
PF14493HTH_40Helix-turn-helix domainDomainInterproscan
PF16124RecQ_Zn_bindRecQ zinc-bindingDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002121DomainHRDC domainInterproscan
IPR002524FamilyCation efflux proteinInterproscan
IPR010997Homologous_superfamilyHRDC-like superfamilyInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR018982DomainRQC domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR027469Homologous_superfamilyCation efflux transmembrane domain superfamilyInterproscan
IPR029491DomainHelicase Helix-turn-helix domainInterproscan
IPR032284DomainATP-dependent DNA helicase RecQ, zinc-binding domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR044876Homologous_superfamilyHRDC domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13710DNA HELICASE RECQ FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0006812Biological Processmonoatomic cation transportInterproscan
GO:0008324Molecular Functionmonoatomic cation transmembrane transporter activityInterproscan
GO:0009378Molecular Functionfour-way junction helicase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030894Cellular ComponentreplisomeInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0043590Cellular Componentbacterial nucleoidInterproscan
GO:0044237Biological Processobsolete cellular metabolic processInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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