| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8010473.1 | BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE | contig_13817_pilon | 19008 | 19874 | + |
| CDS | |||||
| CAI8010473.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8010473.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00494 | SQS_PSY | Squalene/phytoene synthase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002060 | Family | Squalene/phytoene synthase | Interproscan |
| IPR008949 | Homologous_superfamily | Isoprenoid synthase domain superfamily | Interproscan |
| IPR017828 | Family | Squalene synthase HpnD-like | Interproscan |
| IPR019845 | Conserved_site | Squalene/phytoene synthase, conserved site | Interproscan |
| IPR033904 | Domain | Trans-isoprenyl diphosphate synthases, head-to-head | Interproscan |
| IPR044843 | Family | Trans-isoprenyl diphosphate synthases, bacterial-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR31480 | BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004311 | Molecular Function | farnesyltranstransferase activity | Interproscan |
| GO:0009058 | Biological Process | biosynthetic process | Interproscan |
| GO:0016117 | Biological Process | carotenoid biosynthetic process | Interproscan |
| GO:0016765 | Molecular Function | transferase activity, transferring alkyl or aryl (other than methyl) groups | Interproscan |
| GO:0016767 | Molecular Function | geranylgeranyl-diphosphate geranylgeranyltransferase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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