| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8009733.1 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | contig_13648_pilon | 126 | 1017 | - |
| CDS | |||||
| CAI8009733.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8009733.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00126 | HTH_1 | Bacterial regulatory helix-turn-helix protein, lysR family | Domain | Interproscan |
| PF03466 | LysR_substrate | LysR substrate binding domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000847 | Domain | Transcription regulator HTH, LysR | Interproscan |
| IPR005119 | Domain | LysR, substrate-binding | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0006351 | Biological Process | DNA-templated transcription | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0043565 | Molecular Function | sequence-specific DNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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