Detailed information of CAI8007913.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8007913.1DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2contig_12965_pilon30095149+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04561RNA_pol_Rpb2_2RNA polymerase Rpb2, domain 2DomainInterproscan
PF04563RNA_pol_Rpb2_1RNA polymerase beta subunitFamilyInterproscan
PF04565RNA_pol_Rpb2_3RNA polymerase Rpb2, domain 3DomainInterproscan
PF10385RNA_pol_Rpb2_45RNA polymerase beta subunit external 1 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007642DomainRNA polymerase Rpb2, domain 2Interproscan
IPR007644DomainRNA polymerase, beta subunit, protrusionInterproscan
IPR007645DomainRNA polymerase Rpb2, domain 3Interproscan
IPR015712FamilyDNA-directed RNA polymerase, subunit 2Interproscan
IPR019462DomainDNA-directed RNA polymerase, beta subunit, external 1 domainInterproscan
IPR037034Homologous_superfamilyRNA polymerase Rpb2, domain 2 superfamilyInterproscan
IPR042107Homologous_superfamilyDNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0032549Molecular Functionribonucleoside bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP