| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8006428.1 | TRANSCRIPTIONAL REGULATORY PROTEIN | contig_12534_pilon | 14166 | 15011 | + |
| CDS | |||||
| CAI8006428.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8006428.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00158 | Sigma54_activat | Sigma-54 interaction domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001789 | Domain | Signal transduction response regulator, receiver domain | Interproscan |
| IPR002078 | Domain | RNA polymerase sigma factor 54 interaction domain | Interproscan |
| IPR025662 | Binding_site | Sigma-54 interaction domain, ATP-binding site 1 | Interproscan |
| IPR025944 | Conserved_site | Sigma-54 interaction domain, conserved site | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR32071 | TRANSCRIPTIONAL REGULATORY PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000160 | Biological Process | phosphorelay signal transduction system | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0008134 | Molecular Function | transcription factor binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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