| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8006427.1 | RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E | contig_12534_pilon | 13166 | 13897 | + |
| CDS | |||||
| CAI8006427.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8006427.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04452 | Methyltrans_RNA | RNA methyltransferase domain | Domain | Interproscan |
| PF20260 | PUA_4 | RNA methyltransferase PUA domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006700 | Family | Ribosomal RNA small subunit methyltransferase E | Interproscan |
| IPR015947 | Homologous_superfamily | PUA-like superfamily | Interproscan |
| IPR029026 | Homologous_superfamily | tRNA (guanine-N1-)-methyltransferase, N-terminal | Interproscan |
| IPR029028 | Homologous_superfamily | Alpha/beta knot methyltransferases | Interproscan |
| IPR046886 | Domain | Ribosomal RNA small subunit methyltransferase E, methyltransferase domain | Interproscan |
| IPR046887 | Domain | Ribosomal RNA small subunit methyltransferase E, PUA-like domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR30027 | RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006364 | Biological Process | rRNA processing | Interproscan |
| GO:0008168 | Molecular Function | methyltransferase activity | Interproscan |
| GO:0070042 | Molecular Function | rRNA (uridine-N3-)-methyltransferase activity | Interproscan |
| GO:0070475 | Biological Process | rRNA base methylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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