Detailed information of CAI8005649.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8005649.1DNA TOPOISOMERASE, TYPE IA, COREcontig_12321_pilon838811110+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01131Topoisom_bacDNA topoisomeraseFamilyInterproscan
PF01751ToprimToprim domainFamilyInterproscan
PF02481DNA_processg_ADNA recombination-mediator protein AFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000380FamilyDNA topoisomerase, type IAInterproscan
IPR003488FamilyDNA recombination-mediator protein AInterproscan
IPR003601DomainDNA topoisomerase, type IA, domain 2Interproscan
IPR003602DomainDNA topoisomerase, type IA, DNA-binding domainInterproscan
IPR005733FamilyDNA topoisomerase I, bacterial-typeInterproscan
IPR006171DomainTOPRIM domainInterproscan
IPR013497DomainDNA topoisomerase, type IA, centralInterproscan
IPR013824Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 1Interproscan
IPR013825Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 2Interproscan
IPR013826Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 3Interproscan
IPR023405Homologous_superfamilyDNA topoisomerase, type IA, core domainInterproscan
IPR023406Active_siteDNA topoisomerase, type IA, active siteInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR42785DNA TOPOISOMERASE, TYPE IA, COREInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003916Molecular FunctionDNA topoisomerase activityInterproscan
GO:0003917Molecular FunctionDNA topoisomerase type I (single strand cut, ATP-independent) activityInterproscan
GO:0006265Biological ProcessDNA topological changeInterproscan
GO:0009294Biological ProcessDNA-mediated transformationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP