| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8003836.1 | DNA REPAIR PROTEIN RECN | contig_12031_pilon | 5911 | 11383 | + |
| CDS | |||||
| CAI8003836.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8003836.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01558 | POR | Pyruvate ferredoxin/flavodoxin oxidoreductase | Family | Interproscan |
| PF02463 | SMC_N | RecF/RecN/SMC N terminal domain | Domain | Interproscan |
| PF02775 | TPP_enzyme_C | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | Domain | Interproscan |
| PF20169 | DUF6537 | Family of unknown function (DUF6537) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002869 | Homologous_superfamily | Pyruvate-flavodoxin oxidoreductase, central domain | Interproscan |
| IPR002880 | Domain | Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain | Interproscan |
| IPR003395 | Domain | RecF/RecN/SMC, N-terminal | Interproscan |
| IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
| IPR004604 | Family | DNA recombination/repair protein RecN | Interproscan |
| IPR011766 | Domain | Thiamine pyrophosphate enzyme, TPP-binding | Interproscan |
| IPR017896 | Domain | 4Fe-4S ferredoxin-type, iron-sulphur binding domain | Interproscan |
| IPR019752 | Domain | Pyruvate/ketoisovalerate oxidoreductase, catalytic domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR029061 | Homologous_superfamily | Thiamin diphosphate-binding fold | Interproscan |
| IPR046667 | Domain | Domain of unknown function DUF6537 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11059 | DNA REPAIR PROTEIN RECN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0006310 | Biological Process | DNA recombination | Interproscan |
| GO:0009314 | Biological Process | response to radiation | Interproscan |
| GO:0009432 | Biological Process | SOS response | Interproscan |
| GO:0016491 | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0016903 | Molecular Function | oxidoreductase activity, acting on the aldehyde or oxo group of donors | Interproscan |
| GO:0030976 | Molecular Function | thiamine pyrophosphate binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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