Detailed information of CAI8000537.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8000537.1SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52contig_11462_pilon924021144+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04129Vps52_CCVps52/Sac2 family, coiled-coilRepeatInterproscan
PF20655Vps52_CVps52, C-terminalRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000300DomainInositol polyphosphate-related phosphataseInterproscan
IPR007258FamilyVps52Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR048319DomainVps52, coiled-coil domainInterproscan
IPR048361DomainVps52, C-terminalInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14190SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000938Cellular ComponentGARP complexInterproscan
GO:0006896Biological ProcessGolgi to vacuole transportInterproscan
GO:0007041Biological Processlysosomal transportInterproscan
GO:0016791Molecular Functionphosphatase activityInterproscan
GO:0019905Molecular Functionsyntaxin bindingInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:0046856Biological Processphosphatidylinositol dephosphorylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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