Detailed information of CAI8000421.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8000421.1VACUOLAR PROTEIN SORTING VPS41contig_11436_pilon363825972-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyHomeobox

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan
PF12816Vps8Golgi CORVET complex core vacuolar protein 8DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR025941DomainVacuolar protein sorting-associated protein 8, central domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR045111FamilyVacuolar protein sorting-associated protein Vps41/Vps8Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR12616VACUOLAR PROTEIN SORTING VPS41Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005770Cellular Componentlate endosomeInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0030897Cellular ComponentHOPS complexInterproscan
GO:0034058Biological Processendosomal vesicle fusionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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