| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI7998758.1 | 30S/40S RIBOSOMAL PROTEIN S3 | contig_11275_pilon | 64215 | 65303 | - |
| CDS | |||||
| CAI7998758.1 | |||||
| Transcript |
| - |
| Protein |
| CAI7998758.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00189 | Ribosomal_S3_C | Ribosomal protein S3, C-terminal domain | Domain | Interproscan |
| PF00237 | Ribosomal_L22 | Ribosomal protein L22p/L17e | Domain | Interproscan |
| PF07650 | KH_2 | KH domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001063 | Family | Large ribosomal subunit protein uL22 | Interproscan |
| IPR001351 | Domain | Small ribosomal subunit protein uS3, C-terminal | Interproscan |
| IPR004044 | Domain | K Homology domain, type 2 | Interproscan |
| IPR004087 | Domain | K Homology domain | Interproscan |
| IPR005704 | Family | Small ribosomal subunit protein uS3, bacterial-type | Interproscan |
| IPR005727 | Family | Large ribosomal subunit protein uL22, bacterial/chloroplast-type | Interproscan |
| IPR009019 | Homologous_superfamily | K homology domain superfamily, prokaryotic type | Interproscan |
| IPR015946 | Homologous_superfamily | K homology domain-like, alpha/beta | Interproscan |
| IPR018280 | Conserved_site | Small ribosomal subunit protein uS3, conserved site | Interproscan |
| IPR036394 | Homologous_superfamily | Ribosomal protein uL22 superfamily | Interproscan |
| IPR036419 | Homologous_superfamily | Ribosomal protein S3, C-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11760 | 30S/40S RIBOSOMAL PROTEIN S3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003735 | Molecular Function | structural constituent of ribosome | Interproscan |
| GO:0005840 | Cellular Component | ribosome | Interproscan |
| GO:0006412 | Biological Process | translation | Interproscan |
| GO:0015934 | Cellular Component | large ribosomal subunit | Interproscan |
| GO:0022627 | Cellular Component | cytosolic small ribosomal subunit | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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