| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI7998660.1 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED | contig_11275_pilon | 2284 | 3645 | + |
| CDS | |||||
| CAI7998660.1 | |||||
| Transcript |
| - |
| Protein |
| CAI7998660.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06689 | zf-C4_ClpX | ClpX C4-type zinc finger | Domain | Interproscan |
| PF07724 | AAA_2 | AAA domain (Cdc48 subfamily) | Domain | Interproscan |
| PF10431 | ClpB_D2-small | C-terminal, D2-small domain, of ClpB protein | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
| IPR003959 | Domain | ATPase, AAA-type, core | Interproscan |
| IPR004487 | Family | Clp protease, ATP-binding subunit ClpX | Interproscan |
| IPR010603 | Domain | Zinc finger, ClpX C4-type | Interproscan |
| IPR019489 | Domain | Clp ATPase, C-terminal | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR038366 | Homologous_superfamily | Zinc finger, ClpX C4-type superfamily | Interproscan |
| IPR046425 | Family | Clp protease, ATP-binding subunit ClpX, bacteria | Interproscan |
| IPR050052 | Family | ATP-dependent Clp protease ATP-binding subunit ClpX | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48102 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0006457 | Biological Process | protein folding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0009376 | Cellular Component | HslUV protease complex | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0046983 | Molecular Function | protein dimerization activity | Interproscan |
| GO:0051082 | Molecular Function | unfolded protein binding | Interproscan |
| GO:0051301 | Biological Process | cell division | Interproscan |
| GO:0051603 | Biological Process | proteolysis involved in protein catabolic process | Interproscan |
| GO:0140662 | Molecular Function | ATP-dependent protein folding chaperone | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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