Detailed information of CAI7992228.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI7992228.1SPLICING FACTOR 3A SUBUNIT 2contig_1050_pilon1062918615-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00025ArfADP-ribosylation factor familyDomainInterproscan
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan
PF16835SF3A2Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000690DomainMatrin/U1-C, C2H2-type zinc fingerInterproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR006689FamilySmall GTPase superfamily, ARF/SAR typeInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031781DomainSF3A2 domainInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR041838FamilyADP-ribosylation factor 6Interproscan
IPR052092FamilySplicing Factor 3A Subunit 2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR23205SPLICING FACTOR 3A SUBUNIT 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000245Biological Processspliceosomal complex assemblyInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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