Detailed information of CAI7992212.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI7992212.1SUPPRESSOR OF TY 5contig_1050_pilon6174696-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03439Spt5-NGNEarly transcription elongation factor of RNA pol II, NGN sectionFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005100DomainNGN domainInterproscan
IPR006645DomainNusG-like, N-terminalInterproscan
IPR014722Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR036735Homologous_superfamilyNusG, N-terminal domain superfamilyInterproscan
IPR039385DomainNGN domain, eukaryoticInterproscan
IPR039659FamilyTranscription elongation factor SPT5Interproscan
IPR041973DomainSpt5, KOW domain repeat 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR11125SUPPRESSOR OF TY 5Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0006354Biological ProcessDNA-templated transcription elongationInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0032044Cellular ComponentDSIF complexInterproscan
GO:0032784Biological Processregulation of DNA-templated transcription elongationInterproscan
GO:0140673Biological Processtranscription elongation-coupled chromatin remodelingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP