Detailed information of CAI7990197.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI7990197.1ATP-DEPENDENT RNA HELICASE DBP3contig_10219_pilon2907539009+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF06325PrmARibosomal protein L11 methyltransferase (PrmA)FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR025799FamilyProtein arginine N-methyltransferaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR47958ATP-DEPENDENT RNA HELICASE DBP3Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007276Biological Processgamete generationInterproscan
GO:0016274Molecular Functionprotein-arginine N-methyltransferase activityInterproscan
GO:0018216Biological Processpeptidyl-arginine methylationInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0043186Cellular ComponentP granuleInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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