| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI7989137.1 | GTP-BINDING PROTEIN HFLX | contig_10087_pilon | 35251 | 38485 | + |
| CDS | |||||
| CAI7989137.1 | |||||
| Transcript |
| - |
| Protein |
| CAI7989137.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00155 | Aminotran_1_2 | Aminotransferase class I and II | Domain | Interproscan |
| PF01678 | DAP_epimerase | Diaminopimelate epimerase | Domain | Interproscan |
| PF01926 | MMR_HSR1 | 50S ribosome-binding GTPase | Family | Interproscan |
| PF13167 | GTP-bdg_N | GTP-binding GTPase N-terminal | Family | Interproscan |
| PF16360 | GTP-bdg_M | GTP-binding GTPase Middle Region | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001653 | Family | Diaminopimelate epimerase, DapF | Interproscan |
| IPR004838 | Binding_site | Aminotransferases, class-I, pyridoxal-phosphate-binding site | Interproscan |
| IPR004839 | Domain | Aminotransferase, class I/classII | Interproscan |
| IPR005225 | Domain | Small GTP-binding protein domain | Interproscan |
| IPR006073 | Domain | GTP binding domain | Interproscan |
| IPR015421 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, major domain | Interproscan |
| IPR015422 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, small domain | Interproscan |
| IPR015424 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase | Interproscan |
| IPR016496 | Family | GTPase HflX | Interproscan |
| IPR018510 | Active_site | Diaminopimelate epimerase, active site | Interproscan |
| IPR025121 | Domain | GTPase HflX, N-terminal | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR030394 | Domain | HflX-type guanine nucleotide-binding (G) domain | Interproscan |
| IPR032305 | Domain | GTP-binding protein, middle domain | Interproscan |
| IPR042108 | Homologous_superfamily | GTPase HflX, N-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10229 | GTP-BINDING PROTEIN HFLX | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0005525 | Molecular Function | GTP binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0008837 | Molecular Function | diaminopimelate epimerase activity | Interproscan |
| GO:0009058 | Biological Process | biosynthetic process | Interproscan |
| GO:0009089 | Biological Process | lysine biosynthetic process via diaminopimelate | Interproscan |
| GO:0030170 | Molecular Function | pyridoxal phosphate binding | Interproscan |
| GO:0043022 | Molecular Function | ribosome binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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