| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI7988867.1 | ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC | contig_10047_pilon | 7317 | 11310 | + |
| CDS | |||||
| CAI7988867.1 | |||||
| Transcript |
| - |
| Protein |
| CAI7988867.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF02559 | CarD_TRCF_RID | CarD-like/TRCF RID domain | Domain | Interproscan |
| PF03461 | TRCF | TRCF domain | Domain | Interproscan |
| PF17757 | UvrB_inter | UvrB interaction domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003711 | Domain | CarD-like/TRCF, RNAP-interacting domain | Interproscan |
| IPR004576 | Family | Transcription-repair coupling factor | Interproscan |
| IPR005118 | Domain | Transcription-repair-coupling factor, C-terminal domain | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR036101 | Homologous_superfamily | CarD-like/TRCF, RNAP-interacting domain superfamily | Interproscan |
| IPR037235 | Homologous_superfamily | TRCF-like, C-terminal D7 domain | Interproscan |
| IPR041471 | Domain | UvrB, interaction domain | Interproscan |
| IPR047112 | Family | ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47964 | ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003678 | Molecular Function | DNA helicase activity | Interproscan |
| GO:0003684 | Molecular Function | damaged DNA binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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