Detailed information of Bpl_scaf_9649-2.4 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_9649-2.4DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLBpl_scaf_9649187365203574+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13589HATPase_c_3Histidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002099FamilyDNA mismatch repair protein MutL/Mlh/PMSInterproscan
IPR014762Conserved_siteDNA mismatch repair, conserved siteInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR038973FamilyDNA mismatch repair protein MutL/Mlh/Pms-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10073DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0032300Cellular Componentmismatch repair complexInterproscan
GO:0032389Cellular ComponentMutLalpha complexInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08734MLH1; DNA mismatch repair protein MLH1-Mismatch repair ko03430PMID: 28812709
Fanconi anemia pathway ko03460PMID: 28812709
Pathways in cancer ko05200PMID: 28812709
Colorectal cancer ko05210PMID: 28812709
Endometrial cancer ko05213PMID: 28812709
Platinum drug resistance ko01524PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_9649-2.4 global RNA-seq network
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