Detailed information of Bpl_scaf_9470-0.6 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_9470-0.6MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBERBpl_scaf_94703855267266-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR002316FamilyProline-tRNA ligase, class IIaInterproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR033730DomainProkaryote proline-tRNA ligase core domainInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR050062FamilyProline-tRNA synthetaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR42753MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0004827Molecular Functionproline-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006433Biological Processprolyl-tRNA aminoacylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01881PARS, proS; prolyl-tRNA synthetaseEC:6.1.1.15
Aminoacyl-tRNA biosynthesis ko00970PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_9470-0.6 global RNA-seq network
TOP