Gene detail

Detailed information of Bpl_scaf_9451-4.15 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_9451-4.15	DISCS LARGE	Bpl_scaf_9451	337503	411826	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_9451-4.15

GAAATTGGTAACTTAAAGAAACTGACAATACTAGACGTATCAGAGAACCAATTAGATTACCTGCCTGAAGAACTGGGAGGTCTACAAAGTTTAACAGATTTATGTCTGTCTCAGAACTGCTTGGAAAATTTACCTGAAGGAATTGGTCGTTTAAGGAAACTGTCTATATTTAAAATTGACCAGAACAGACTGTTAACATTAACTCCAGCTATTGGCAATTGTGAAGCCTTACAAGAACTTATAATAACAGAGAATCTATTATCTGATTTACCTACATCTATAGGTAGATTAAGGAGTATGTCTGTATTCAATGTAGATAGGAACAGGATAACAGATATTCCAGTAGAAATAGGGAAATGTGCACGACTTAATGTCTTGTCTTTGCGAGACAATCGCTTGTTACGACTACCACAAGAGTTAGGAAGATTAGAAGATTTACATGTTCTAGATGTATCGGGCAATAGGTTAGAATATCTACCCATAACAGTAGCTAATTTAAATCTTAAGGCTTTATGGCTATCTGAGAACCAGGCTAAACCTATGTTGAAGTTCCAGACAGATTTTGATGAGAGAACTGGCCAGCAAGTCCTAACATGCTTCTTGTTACCACAACAAGATTTCCACACAGAGAGTATGGAGAATTTGTTACGAGGAAGTACGACAACAGACCAGGATAGTCGACTCAGTGACAACATTGATCGTCATAGAGACAGCAAGATACACTTTGATGTTCCTAAGGACGATGATGATGATGATACAGAAAGTGAAGGGGATTTGGTGTTTATGCCGTCACGAGATAATGATCCTCGATGGTCAATAACTTTGGAAGTAGAGAAGCCAAATGTAGAAAAAAGAAGTTCTAACACCTCAGTACCCTCCCCTGTAATAAAAGCTCCAGAACTAGAGGGACCTCCTCGTTACCATGGTCACATAGACCAACGACAACATACAAGTACAAGTAAAGTAGAAAGTGTCGATGAAGAAGAAATAGAACCACCAAAAGAAACACAACCATTGTTAAAGGAGGTCACAGTCGCTGATGCTCCTGTTGTGACTTATCAAGAACATAATGGTTACTATGACAACGATGAGGTCGAGGAAGAGGCTAGAGAGGAAAGTGAAGAGGAACATGTCGAGGAAGAACAAGGCAAAGATGAAGAGACTGATTCTGATGATGAAAATCAACAACGTGAACGAGTGGTAGGATTTGATGTAGAAATAGAGGATAACAACGAAAGAAAGACCGGTCTGAGACGTCGTGATACACCGTACTACAAGAAAAACAAGAGAATAATTAAAGACGATCAATCCAGGGACAAAGTGTTGGAAATCCTGGCACAGATTGCAGCAAAGAAAGAAGGTGGTGATGGACAGAACGAGGCTGGTGATGGTGAGAATTCACTAGAACCTGAAGTTGAAACAGAACTATTGAAGATCCATATTAACAGACAGCCTGGACAGGGTCTAGGAATCTCCATAGCAGGTGGTAGAGGGTCCACACCATTCAAAGGGGATGACGAGAGTGTATTTATTTCTCGTGTATCAGAAGATGGACCAGCAGCAGAAGCTGGTGTAAGAGTTGGTGATAAATTAGTTTCGGTAAACGGTGTCAATCTGATAGATGCTGACCATTACGATGCAGTAGATGTATTAAAGTCTAGTGGCAATAATATATCAATGGTTCTTGGCAGGGAGAAAATTGTTGAGCCTAAACAAGAGGAGCCAAAAGAGGAAGAAGAGCCAACAACAGGATTTGCTACAGTTTCGTTTGAGCAAGAACCGGACACAGAGGTCTATGGAGAGAAAATTTCGACAGCGTTGCTTCGTGATCATACAGGTTTAGGTTTCAGCATAGCAGGAGGAAGAGGGTCTATACCATTCAAAGGCAATGACCAGGCTATATACATATCTCGTGTGGTGGACGGTGGAATCGCTCAGAGAGATGGCAAGATTAAAGTGGGGGATAAACTTCTATCTATCAATGGTGTTGATATGCAGGACGCCAGACACGATCAGGCCGTGGCTTTGTTAACTGGAGTTGATAATGAGATTCGATTGGTTGTGTATAGGGAAAAAGTTGTTCCAAAGGACGAAGCAATAGTGTCTCCACCTAGTGGAGAAAAATTAGAAAAAATAACGCAGCCACTGATCAGCTGGCAGCAAACACCGCCGACTACTGGAATTAATGATACATTTACGGTCACGCAGTCGCCAGTCATGGCATCCCCACCACCCACACAACCAAGTGAAACATTTACTTCCACCGAGGCTACGGTAGTAACATTGGCTAAGCAACCAATCATTAGTAGTCCGAGTCCATATTCAGCTGCAATACCATCGTCATATACATATCAATCACAGAGATCCCCGTTGTCACCCCAACAAGTTTCCCCCGCGGCCCCTATATCACCCCGTCAGGACACATCACCATCGCAAGTCAGTCCAAGGAATCTGTCGACTGAATGGTCAACACCACCTACTGCTGTGCAGCCACCAAGATTTGTCTACCCTGGCTTTAAATCACGGACTTCGTCATCTAGTAAAACAGTAGAAACTAAAAACATTGAAAATGAAAGTAGGAATAATCAAAGTGAAAGTAGAAATATTTTACTAGAGCAACAAAATAAGACGATTACATTAGAAAGGGAGACAATTAAAAGTAATCATGTGACTTTTAATAGTAGTGATAATTCTAAGCATGTTGTAGACAATATAACAATAGTAAAAGCTGGAGGTCCTTTAGGTTTAAGTATTGTGGGAGGCAGCGACTTATCCAGTCATCCGTTTGGCGTGGATGAACCAGGCATTTTCGTTTCGAAGATAAATCCTGATGGTGCAGCATCTAAAACATTTTTAAAAATTGGTGATAGGATCTTATCTGTGAATGGTAAAGATGTAACGAAGTGTAAACATCAAGAAGCTGTGATGGCATTAATAGCTCCTACCTATGATATACACCTGGTTGTCAGGCATGATCCTCCTCCTAAAGGATTACAGGAATTATCAGTATTCAAAGCTGCTGGGGAGAAGTTAGGTATGAGTATAAAAGGTGGCTCTAAAGGCATGGGGTATAATACTACTACAGAAAAAACAGATGAAGGCATCTTTATATCTAAGATTAGTAGTGATGGTGCAGTCGCTAAAGATGGCAGATTGAAAACAGGTCAAAGAATTTTAGAGGTAAATGGTACAAGTTTAATTGGAGTAAACCACCAAGAGGCCGTCCGTGCCCTGCGGAGCGTGACGGATAAAATGATTATAATGGTATGTGACGGAGAAGATCCTACGTCACCAGATCTACAATCACCTGATTCTCCTAACGCCCCCGTAACTCCTAGAATGCGTGATAATTCCGTATCCAGTATTGATAAAGATGACGAGGATCACATGATCATGCGCAAGCAACAACTTAAGAAAGATGTCCAGAGTAAAGTTACAACAGAAGTCTCACCCAGCAAGATACCTGTAGCCAGGGTAGAACCTAAAATTATTACTGACTCTAATCAAGTGCCTCCTGGTCATAAACTCGACCATCCAGATGTCATACCTGTGACACCTGTGAAAACTGAACCTGTGCCTTCTGACCATTCACCTGTAAAGCGTCCACCTGTTCCACCGAAACCCTCGGCAAAACACGAGGATTTACAACACAAGACTACGAAAATTCCATTAGTCAAGCCAGTGTCTCCACCAAAACCTCCGGACGATTTGACAACGAGTGTTATCAGACAATCCAGAATTCCTATGGCAAAATCTCCATCATTAGCGAAGGAAGAAAGCTTCGAGGACGACTCTTTTAGAAAATCAAATACGCCTTCACCACCACAGAAAAGTGAACCAATTCAAATATCTCGTATTCCAATGGCTTCACCGACATTCAGTGCTAAAGAGAATAAAAATGTAGTGGATCCAAATAAACAGTCACAGATACCTACTGCCAAGTCTGAAAATTTAGACAATGATCCGATTAAACAGTCTCAGATCCCAACAGCCAAGTCTGAGGACTTAGACAACGATCCGATTAAACAGTCTCGGATCCCAACTGCAAAATCTGTAGACTCAGACAATGATCCGATTAAACAGTCTCGGATCCCAACTGCCAAGTCGGTAAAACCGGAACTTCCATCTAAACCTAAGACGCCTGCTTCACCATCCTTGCCTAGCGACATCGAGAAACATGAAGAATTGTCGTTTAGATTGAAGAAAAAGTATTTTGAGAAGGAAATCAAAGAACATTCAGAAGAAAAGCCTTCAGAGAAGAAAGTGAACAGTATGACGACAGAGGAGCTGGTTTCTGACGTCACGAGTCATGTTAACTCTAACGAGGATTACGAAGGTGAACTTGCAAGTCCATCCAGAATTCCTGTCAGGACGGCAAAAGCCGAAAAACGTATGCAGGATCGTCTTCGCCAAGAGGGACTTGAAGCGCCACCTGTTGAAGACATTAAATTATCACCTGCTGAAGAGAGGGCACTCCAAGCTGAAAAACGGGCAGCATGGCGTGCGGCCAGGATGAAGTCTTTAGAGGTAGATGCGATGAAAGCTGAAGCTGTGATAGCCAAAGCCCAGGAATTTAAGAAAAATACTGCTGTAGAACTTGCCTTAGCAGTAAAAGACAATTGTCAGGAGTGCAACACTTATGAAGAGGAAGAAAATAAATTTAACCAGAATGGAGAAGAATCTATAGAAGTTACCAAACAGAATATAATAGAATTAAATATAGAAGATGGACTGGCAAAATCATGA

Transcript

Bpl_scaf_9451-4.15

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595	PDZ	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR050614	Family	Synaptic Scaffolding LAP/MAGUK Families	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23119	DISCS LARGE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005912	Cellular Component	adherens junction	Interproscan
GO:0009790	Biological Process	embryo development	Interproscan
GO:0014069	Cellular Component	postsynaptic density	Interproscan
GO:0016323	Cellular Component	basolateral plasma membrane	Interproscan
GO:0030054	Cellular Component	cell junction	Interproscan
GO:0043113	Biological Process	receptor clustering	Interproscan
GO:0045197	Biological Process	establishment or maintenance of epithelial cell apical/basal polarity	Interproscan
GO:0045211	Cellular Component	postsynaptic membrane	Interproscan
GO:0097120	Biological Process	receptor localization to synapse	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan
GO:0098887	Biological Process	neurotransmitter receptor transport, endosome to postsynaptic membrane	Interproscan
GO:0098968	Biological Process	neurotransmitter receptor transport postsynaptic membrane to endosome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16175	SCRIB; protein scribble	-	Hippo signaling pathway	ko04390	PMID: 28812709
			Hippo signaling pathway -fly	ko04391	PMID: 28812709
			Tight junction	ko04530	PMID: 28812709
			Viral carcinogenesis	ko05203	PMID: 28812709
			Human papillomavirus infection	ko05165	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_9451-4.15 global RNA-seq network