Gene detail

Detailed information of Bpl_scaf_9423-0.26 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_9423-0.26	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Bpl_scaf_9423	59831	83656	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_9423-0.26

ATGACAAAGGGTGCTGTATTGTGTGTAGCATTTAGAGATGCCGACGGAAAGAAGCCAGTTCGGATGCTTAGTACCGCCCTTGCTGCTCAAGATTTGCCAAGAGGTCGTAGACCTTCAATTCACATAAGTCCTACAAATGTTGATATTGTTGAAGGACAGAGCCACACCATTACATGCTCTGTATCAAGTATCTCAGTTATTACTGATATAACATGGATCAAAACAACTGCAGTTGGTTATGAAATTGTTGATGTGGTCGGTGTGGACGGGAAGTTCTCTGGTGGAACTCTGTCTGATCCTTCACTGACAATAAATAACATTCACAAATCAGATGAAGGTACCTACGTGTGCAGAGCAACAAACTGTTTTGGAACAGCATCAAGCGAATATTCAGTTCTAACATTCAAAGGTAGACCTTCAATTCACATAAGTCCTACAAATGTTAATATTGTTGAAGGACAGAGCCACACCATTACATGCTCTATATCAAGTATCTCTGATATAACTGATGTAACATGGATCAAAACAACTGCAGTTGGTTATGAAATTGTTGATGTGGTCGGTGTGGACGGGAAGTTCTCTGGTGGAACTCTGTCTGATCCTTCACTGACAATAAATAACATTGTCAAATCAGATGAAGGTACCTACGTGTGCAGAGCAACAAACTGTTTTGGAACAGCATCAAGCGAATATTCAGTTCTAACATTCAAAGATGAAGCTGATTCCCTGTCAAAAGAAGAAAGCAACTTTTTTCGTCTCTATTTTCTCTGTCAGAAAATTGCAACCCAGGCTGTTCGTTTATTTTTTGACAGTAAAGTACCTGGACTAGATTCATTTCTTAAGCAGCACAAGTCAAATCTTACATCTACAAGTAGTGTTTACAGATGTACATGGGAACAAAAGGCGATACTGTTTCCTGGTGGTCAGGTTGCTGTTGTTTCTACAGATTTTGACTTCACCTTGCTATACAAACTGATCAGAAACCTTTTAACAGCTATTCCTGCTCCAACTTGCGGATGGGGAAATCAGCCATTACCTGGACATTTAAATGAAACAGATGACATCGAAAGAATTCGACATTTAAGAAATAATCTTGCACACAATTCTGAATTTGAAATCTGTGATACTGATTTTTCTACCCACTGGGCTGATTTATCACAGGCAATTAACAGATTAAGCAAAGGTAGCTTATCAACTGAAGTAGAGTCAATGAGAACAAAAAAGTTTGACAAATGCATAATAAATGAAATGGAAGAAGATATACTAACAGAACTGAAAGAAATACGAGAAGAATGTATGGAACTAAATCAAAAGGTGACTGAATTCAGTACAGATATTGCTGAAAATAAACAGAAAATCTACGACATCAATGATAGACACATACCATTAAACATTCGGAAAGGCCACATTGAATTGATTAAGAAATGGAGACTAGAGGATAAACTATTTTATGATGAAACCGGGGGATTTAAAGCGGCATTGAAAATGATCCAGTCTGAAAATTATTTGACGATAATTGGTGGACCAGGATCGGGAAAGACTGCCACAGCTCGGCATATTGCATTACAGCTAGAGGAGCAAGGATGGGAAGTTGTGCCAGTGTGTAGACTAGACGAAATCATACAATATGGAGACAGAGATCATAAACAAGTTTTTGTACTTGATGATGTATTAGGTATTTTTGCTGTAGATATGAATATTTACAATCATATTATCAACCATAAAGAACCAATTTTCGAAGCAATAGGGGGGACATCAAAACTATTGTTTACTTGCAGAAGGTTGGTGTATAAGGAGTCTTTTAAGCTTGGATTGTTTGTAACAGAAAACGTCGTAGATTTACAGAGTAAAGATAATCAGCTGACTGAAACAGAAAAGAGGGCTATTTGCCAATATCATTGTAAAGCAAAAGGTGTAAACCCAGACCTCTATACATCCCTTTCATTTACCAAAGCCAATCATATGTTTCCATTTCTTTGTAAACTATTTTCAATGGAAGAAAAATACCAGCAGTTGGGAGAAAACTTCTTCAATAAACCCTTCGAATATTTTATTATTGAACTGGGCAAACTGCAGCGCACAAACACTATTCAATATGCTGTTCTTGTCTTGTGTCTAGTTAATGGCAAATTATCAGTTGAGCGTTTACCCCACAAACGCATGCAGAAGGAGGTATTTAATAATTGTGGGGTAAATCTAGGTACCCCAGGAAAACAAATAAAAGATGCCATTTACCACATGTCAGAAACCTACTTCACCAAGTTAGAAACTGAATATACATTCACACATGACTTTATATTTGAAGTTATCGCCTATCATTATGGTCGTCAAAATCAACATCATATATTAAAGTATTTATCTAGT

Transcript

Bpl_scaf_9423-0.26

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF18738	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan
PF20720	nSTAND3	Novel STAND NTPase 3	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013106	Domain	Immunoglobulin V-set domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR041249	Domain	DZIP3-like HEPN domain	Interproscan
IPR049050	Domain	Novel STAND NTPase 3	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_9423-0.26 global RNA-seq network