| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_9415-5.15 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 | Bpl_scaf_9415 | 516397 | 542156 | + |
| CDS | |||||
| Bpl_scaf_9415-5.15 | |||||
| Transcript |
| Bpl_scaf_9415-5.15 |
| Protein |
| Bpl_scaf_9415-5.15 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR044570 | Family | Histone-lysine N-methyltransferase Set1-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45814 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0042800 | Molecular Function | histone H3K4 methyltransferase activity | Interproscan |
| GO:0048188 | Cellular Component | Set1C/COMPASS complex | Interproscan |
| GO:0051568 | Biological Process | obsolete histone H3-K4 methylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11422 | SETD1, SET1; histone-lysine N-methyltransferase SETD1 | EC:2.1.1.43 | Lysine degradation | ko00310 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_9415-5.15 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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