| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_9415-3.6 | RING FINGER PROTEIN 25 | Bpl_scaf_9415 | 364332 | 381871 | - |
| CDS | |||||
| Bpl_scaf_9415-3.6 | |||||
| Transcript |
| Bpl_scaf_9415-3.6 |
| Protein |
| Bpl_scaf_9415-3.6 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05773 | RWD | RWD domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR006575 | Domain | RWD domain | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR016135 | Homologous_superfamily | Ubiquitin-conjugating enzyme/RWD-like | Interproscan |
| IPR039133 | Family | E3 ubiquitin-protein ligase RNF25 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13198 | RING FINGER PROTEIN 25 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0051092 | Biological Process | positive regulation of NF-kappaB transcription factor activity | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10640 | RNF25, AO7; E3 ubiquitin-protein ligase RNF25 | EC:2.3.2.27 | Ubiquitin system | ko04121 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_9415-3.6 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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