| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_9004-3.3 | RING ZINC FINGER PROTEIN | Bpl_scaf_9004 | 325755 | 351476 | - |
| CDS | |||||
| Bpl_scaf_9004-3.3 | |||||
| Transcript |
| Bpl_scaf_9004-3.3 |
| Protein |
| Bpl_scaf_9004-3.3 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13639 | zf-RING_2 | Ring finger domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR050731 | Family | HRD1 family E3 ubiquitin-protein ligases | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22763 | RING ZINC FINGER PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| - | - | - | - |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10601 | SYVN1, HRD1; E3 ubiquitin-protein ligase synoviolin | EC:2.3.2.27 | Protein processing in endoplasmic reticulum | ko04141 | PMID: 28812709 |
| Ubiquitin mediated proteolysis | ko04120 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_9004-3.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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