Gene detail

Detailed information of Bpl_scaf_9002-0.24 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_9002-0.24	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM21	Bpl_scaf_9002	40547	49635	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_9002-0.24

AAACCGCCTGTCCATTAGGTTGAACATCACTGACAATGATTCCTACTTGTCGTGTTGTCTCTATAAAGAGTTCAAGTTGCTGTTCTAATGCTTCGAAACGGCTAACTTTCTCACTCATGTTTTGTGTTTCGTTTACAGACCGGATATCTTTCGATGGGAGATAACCCCGAAATATACAGGGCGATAACTCGGGATCCCCGATAACTCTAAATTTTGAAGCTTTTCGAACTTCACTTGTTTGACATTGGCCTTTCCATACACGAAAACAAACATTTATGTCTATATTTTTACATTTCTTATTTTTGACATGAACTGGTAATACAAAAACAGAATGCACAGTTATACTATACTCAGTAGAACAATATTTCTTAAAAAAGGAATTTTATTTGGGTCTGATCACAGTTTAAGATTCTGTTTCCAGAGACTAATACTAAATTCACATGGAAATGTCTTTCATGGTAAAACAGTCCCGAGGACAAGCAGCATTAAAATATGTCAAAATAATTGTATGCTTATGACAAGTAGAAATTATAGCACTAAAGATGCAAAGACAAAAACAGGAAAAGAAATAGATCTATCAAGAGAAAATCCTTATGCTGGATTAAGTGCTGGTGAAAAAGTAAAACAAGCGAGCAAAGATGCATCATATTTAGTGATAATACTTGGGGGTCTTGGGGTCATGGGAATAATGTTTTATACAGTGGGCAAGGAATTGTTTTCTAAACAGAGTCCTGGTGGTGTTTACAATCAAGCTTTAAAACTTTGTAAGAAAAATGATGAAGTAATTGATTATTTGGGAGAGCCAATCACAGGACATGGAACATCAGGTAGTAGAAGAAGGAGACAAATTGTCAACTCTCACAATTTTCTGGTTGATGGTGTGAAGCATATGAGAATACAGTTTTATATAAATGGTCCTTACAGAAAAGGTACAGTCCATGTAGAAGTTTATGAGGATGAAAATAAGAAATACCAGTATAAATATGTGATTGTTGAATTAGATGGATATCCAGCAAAGACTATAGTGATAGAAAATAACAGATCACAATAAACTATTCATTATACCATGTGTTACATGTACATGTAAAAAAAAGTCAATTTATTATATATTATATATGGCCATGTGATTTAAAAAAGACATTGTAAATGTCTATCATAATTTTTGTGTAAAACATCAAGACATATATATCAGTGTTGCAATGAATTTTTCAAGAAAAATAAATAGATTGAAAATTTGGTATACCGGTACTCTATCTGCCTCGATAATTCCTCTGCTAATATACCAAATGCATTGAATTTGAAGGGATATGTTTTACTGGTTAGAACTTGTGTATTCCTTACTGAAGAACAACTCTATTATACAAATACAGTGAAACCTGTTTAAACAGAACCTCCTTGGGACAAACTGTTCAACCTCCTTGGGACAAACTGTTCAACCTCCTTGGGACAAACTGTTCGGAATACAGCTCAATTAGCAAATGTTTCCTACATTAGGATTTTTATTTAAAGTGGTTTTTACAGGAGTCTAGTTTACTCAGGGTTCAGTTTAGACAGGTTTCACTGCAATACACGAGAAATTGAACACATAAAACACCTCTATTTAACAAGCTGTTATACCATTTATTCAGTTATTCATTTTTTGAAAGTCTTTTAAATGAATGATTAAATGTACATTATGAAGTTCATATCTATAGATTTTTACCAATCTAGCTGTAGAACTAGTTTCACACAAATTGTAAAAGACCAGAAATAAAAAAAAGTGCCTAGGTATATTCCCTTTATACAATATACTACACACAGGTGACCTCTTACAATAATGTGTACCATATAATGATGTTGTTGTTGTTTTGCTGTTTGGTGGTGTTTAATGCCACTTACAACAATATTTCAGTTACTAGTATATCGTGGTGGTCAGTTTTATTGGTGGAGGAAACCGGAGGACCTGGAGAAAACCACCGACCTGTTGCAAGTCACTGACAAACTCTATCACATAATGTTGTACACTTCGCCCTGATCGAGATTTGAACTCACAACATCAGAGGTGATAGGCACTGATTGCATAGGTAGTTATAAATCCAACTACCATCTGATCATGGCCATGACAGCCCCAACCATGTAATGATACACAACCTTACTGCACATCTACAGACACAAAAACAAACATATTTTTTTAGATATTAAATATAAATTTCAATTTTATTTCCCTGATCTTCGTGCTGTTGCTTTTGAATTTTGGAATCTTCTGATAAGGATCTTATTAGGAGCTTCCTAAATATGTAATGATGACAAAATTTTAAAAGATTATTGCGCATTTAAAATAAATTAAAGATAAACGCACACTGAATAATTTGATACTGAGCCTTAATAATATGCAAAATATTCCATCTCTGTGATGATCATGTATTTTAATGGTTTAAGTGATGAAAACATCAATAAAATGAATAATTAAGCTTTTTTGTTTTGAAAATACTTCTGTTGCATTTCAGTAATAACATTTCACTACAAAAGGGTCTGTAACTTTTCAGTTTGTGTATAATCACATTCCCAGCCTAAAATATAGACAGAATCGGATTGGGTCTTAAAACCAGCAAGTGCATCTGTCATCTATCAGGTCAGACAATGGTTCATTAATATTTTATTTATCTGATCCTCCCATCTGCCATTTCCCATATACTCCTATAGCCAGTCCACCTCTGAATATAGTAAGAGGTAATAGGACGAAATGCTAAAATTCTAGATCAAACAGTGATTTGGTAGCTGTAGAACTAGTATCACTCAAAATCTAGTAGTCTTATCATAGTTTTTTGTAGCCC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08294	TIM21	TIM21	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013261	Family	Mitochondrial import inner membrane translocase subunit Tim21	Interproscan
IPR038552	Homologous_superfamily	Tim21 IMS domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13032	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM21	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005744	Cellular Component	TIM23 mitochondrial import inner membrane translocase complex	Interproscan
GO:0030150	Biological Process	protein import into mitochondrial matrix	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17796	TIM21; mitochondrial import inner membrane translocase subunit TIM21	-	Mitochondrial biogenesis	ko03029	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_9002-0.24 global RNA-seq network